Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_22105 | Not Available | Positive | 5092092 - 5092304 | 8389.09 |
| repb family plasmid replication initiator protein | DW935_22110 | Not Available | Positive | 5092467 - 5093624 | 45203.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_22115 | Not Available | Negative | 5094415 - 5095911 | 56804.6 |
| tonb-dependent receptor | DW935_22120 | Not Available | Negative | 5095924 - 5098815 | 106963.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_22125 | Not Available | Negative | 5098933 - 5100474 | 58745.0 |
| tonb-dependent receptor | DW935_22130 | Not Available | Negative | 5100475 - 5103405 | 108841.0 |
| is21 family transposase | DW935_22135 | Not Available | Negative | 5103421 - 5104254 | 33205.7 |
| hypothetical protein | DW935_22140 | Not Available | Negative | 5104788 - 5105024 | 8989.6 |
| amidoligase enzyme | DW935_22145 | Not Available | Negative | 5105030 - 5105977 | 36207.5 |
| mobilization protein | DW935_22155 | Not Available | Positive | 5106663 - 5107214 | 21089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

