Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence-associated protein e | DW935_22055 | Not Available | Positive | 5087739 - 5088890 | 45288.6 |
| dna-binding protein | DW935_22060 | Not Available | Positive | 5089386 - 5089637 | 9638.41 |
| hypothetical protein | DW935_22065 | Not Available | Positive | 5089672 - 5089887 | 8413.26 |
| hypothetical protein | DW935_22070 | Not Available | Positive | 5089959 - 5090348 | 15156.2 |
| hypothetical protein | DW935_22075 | Not Available | Positive | 5090395 - 5090574 | 6728.84 |
| hypothetical protein | DW935_22080 | Not Available | Positive | 5090591 - 5090782 | 7123.68 |
| hypothetical protein | DW935_22085 | Not Available | Positive | 5090795 - 5091001 | 7800.2 |
| hypothetical protein | DW935_22090 | Not Available | Positive | 5091032 - 5091250 | 8409.15 |
| hypothetical protein | DW935_22095 | Not Available | Positive | 5091269 - 5091586 | 12712.0 |
| hypothetical protein | DW935_22100 | Not Available | Positive | 5091620 - 5092102 | 19008.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

