Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-poly-alpha-d-galacturonosidase | DW935_22000 | Not Available | Negative | 5075826 - 5076224 | 15875.0 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DW935_22005 | Not Available | Negative | 5076261 - 5076581 | 12294.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | DW935_22010 | Not Available | Negative | 5076575 - 5076823 | 9201.96 |
| hypothetical protein | DW935_22015 | Not Available | Positive | 5077276 - 5078526 | 48231.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW935_22020 | Not Available | Negative | 5078980 - 5080866 | 72167.2 |
| susc/raga family tonb-linked outer membrane protein | DW935_22025 | Not Available | Negative | 5080894 - 5084142 | 119383.0 |
| hypothetical protein | DW935_22030 | Not Available | Negative | 5084164 - 5084345 | 6158.64 |
| glpgli family protein | DW935_22040 | Not Available | Negative | 5085002 - 5086708 | 63516.1 |
| dna-binding protein | DW935_22045 | Not Available | Negative | 5086787 - 5087425 | 24117.6 |
| hypothetical protein | DW935_22050 | Not Available | Positive | 5087427 - 5087633 | 7958.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

