Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW935_21935 | Not Available | Negative | 5060996 - 5061417 | 16637.2 |
| tonb-dependent receptor | DW935_21940 | Not Available | Positive | 5062008 - 5065112 | 113836.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21945 | Not Available | Positive | 5065127 - 5066992 | 70698.2 |
| hypothetical protein | DW935_21950 | Not Available | Positive | 5067421 - 5067873 | 17197.1 |
| hemolysin | DW935_21960 | Not Available | Positive | 5068888 - 5069994 | 42003.4 |
| hemolysin | DW935_21965 | Not Available | Positive | 5070004 - 5071551 | 58813.5 |
| porin family protein | DW935_21970 | Not Available | Positive | 5071593 - 5072138 | 20433.0 |
| hypothetical protein | DW935_21985 | Not Available | Positive | 5073700 - 5074278 | 22251.3 |
| hypothetical protein | DW935_21990 | Not Available | Negative | 5074282 - 5075331 | 40418.7 |
| hypothetical protein | DW935_21995 | Not Available | Negative | 5075547 - 5075738 | 6891.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

