Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW935_21885 | Not Available | Negative | 5047790 - 5048027 | 9005.92 |
| hypothetical protein | DW935_21890 | Not Available | Positive | 5048344 - 5048532 | 7385.01 |
| crp/fnr family transcriptional regulator | DW935_21895 | Not Available | Negative | 5048636 - 5049238 | 23444.3 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21900 | Not Available | Negative | 5049248 - 5050840 | 60954.6 |
| susc/raga family tonb-linked outer membrane protein | DW935_21905 | Not Available | Negative | 5050877 - 5053573 | 98617.1 |
| hypothetical protein | DW935_21910 | Not Available | Positive | 5054290 - 5054529 | 9121.88 |
| hypothetical protein | DW935_21915 | Not Available | Positive | 5055115 - 5055348 | 9175.22 |
| hypothetical protein | DW935_21920 | Not Available | Negative | 5055659 - 5056447 | 28499.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21925 | Not Available | Negative | 5056472 - 5058013 | 57185.1 |
| tonb-dependent receptor | DW935_21930 | Not Available | Negative | 5058038 - 5060977 | 109007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

