Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_21730 | Not Available | Positive | 5011296 - 5011490 | 7871.42 |
| hypothetical protein | DW935_21735 | Not Available | Negative | 5011767 - 5012078 | 11577.8 |
| tonb-dependent receptor | DW935_21740 | Not Available | Positive | 5013395 - 5016490 | 114368.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21745 | Not Available | Positive | 5016519 - 5018156 | 61105.7 |
| hypothetical protein | DW935_21750 | Not Available | Positive | 5018323 - 5018727 | 14894.2 |
| hypothetical protein | DW935_21755 | Not Available | Negative | 5018850 - 5018989 | 5331.53 |
| hypothetical protein | DW935_21760 | Not Available | Negative | 5019120 - 5019992 | 33609.9 |
| glycosyltransferase | DW935_21765 | Not Available | Negative | 5020004 - 5021131 | 43267.0 |
| glycosyltransferase family 2 protein | DW935_21770 | Not Available | Negative | 5021488 - 5022186 | 26815.4 |
| glycosyltransferase | DW935_21775 | Not Available | Negative | 5022183 - 5022905 | 28128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

