Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | DW935_21665 | Not Available | Positive | 4997534 - 4998379 | 33717.6 |
| hypothetical protein | DW935_21675 | Not Available | Negative | 4998921 - 4999178 | 9880.11 |
| hypothetical protein | DW935_21685 | Not Available | Positive | 4999670 - 5000791 | 41958.7 |
| hypothetical protein | DW935_21690 | Not Available | Positive | 5001168 - 5001407 | 9490.44 |
| porin family protein | DW935_21695 | Not Available | Negative | 5001593 - 5002114 | 19802.5 |
| hypothetical protein | DW935_21700 | Not Available | Negative | 5002269 - 5002465 | 8326.1 |
| mobilization protein | DW935_21705 | Not Available | Positive | 5002466 - 5003095 | 24811.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21710 | Not Available | Negative | 5003400 - 5005382 | 75085.0 |
| tonb-dependent receptor | DW935_21715 | Not Available | Negative | 5005399 - 5008644 | 120754.0 |
| dna adenine methylase | DW935_21725 | Not Available | Positive | 5010742 - 5010873 | 4860.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

