Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW935_21370 | Not Available | Positive | 4935364 - 4936686 | 51528.5 |
| hypothetical protein | DW935_21380 | Not Available | Positive | 4938088 - 4939701 | 60890.3 |
| hypothetical protein | DW935_21385 | Not Available | Negative | 4939829 - 4941145 | 47511.9 |
| fimbrillin family protein | DW935_21390 | Not Available | Negative | 4941142 - 4942137 | 37301.4 |
| aaa family atpase | DW935_21395 | Not Available | Negative | 4942435 - 4944045 | 62446.3 |
| hypothetical protein | DW935_21400 | Not Available | Positive | 4944093 - 4944311 | 8468.36 |
| hypothetical protein | DW935_21405 | Not Available | Negative | 4944308 - 4945423 | 41980.7 |
| hypothetical protein | DW935_21410 | Not Available | Negative | 4945512 - 4948637 | 117178.0 |
| helix-turn-helix domain-containing protein | DW935_21415 | Not Available | Negative | 4948741 - 4948987 | 9192.14 |
| methyltransferase | DW935_21420 | Not Available | Positive | 4948988 - 4949448 | 17783.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

