Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | DW935_01760 | Not Available | Negative | 389084 - 390352 | 45609.1 |
| s9 family peptidase | DW935_01765 | Not Available | Negative | 390368 - 392581 | 83624.4 |
| rna methyltransferase | DW935_01770 | Not Available | Negative | 392588 - 394036 | 56204.3 |
| type ii toxin-antitoxin system hicb family antitoxin | DW935_01775 | Not Available | Negative | 394548 - 394739 | 7387.41 |
| serine acetyltransferase | DW935_01780 | Not Available | Negative | 394890 - 395798 | 32813.2 |
| ribonuclease r | DW935_01785 | Not Available | Negative | 396099 - 398246 | 81953.4 |
| cation transporter | DW935_01790 | Not Available | Positive | 398377 - 399279 | 32965.4 |
| nad(p)-dependent oxidoreductase | DW935_01795 | Not Available | Positive | 399290 - 400336 | 40078.3 |
| phosphatase pap2 family protein | DW935_01800 | Not Available | Positive | 400327 - 401304 | 37786.7 |
| duf2807 domain-containing protein | DW935_01805 | Not Available | Positive | 401481 - 402332 | 29091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

