Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serpin family protein | DW935_21245 | Not Available | Positive | 4916761 - 4918002 | 46555.0 |
| carboxypeptidase regulatory-like domain-containing protein | DW935_21250 | Not Available | Positive | 4918103 - 4919602 | 58953.0 |
| type i restriction endonuclease subunit r | DW935_21255 | Not Available | Negative | 4919694 - 4920636 | 36410.8 |
| site-specific integrase | DW935_21260 | Not Available | Positive | 4920637 - 4920992 | 13205.2 |
| hypothetical protein | DW935_21270 | Not Available | Negative | 4921322 - 4921561 | 9115.13 |
| hypothetical protein | DW935_21275 | Not Available | Negative | 4922001 - 4922240 | 9086.97 |
| peptidoglycan domain protein | DW935_21285 | Not Available | Negative | 4922524 - 4923048 | 19641.5 |
| hypothetical protein | DW935_21290 | Not Available | Negative | 4923067 - 4923684 | 23569.1 |
| hypothetical protein | DW935_21295 | Not Available | Negative | 4923733 - 4924020 | 11235.8 |
| site-specific integrase | DW935_21305 | Not Available | Negative | 4924338 - 4925555 | 47065.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

