Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW935_21190 | Not Available | Negative | 4897275 - 4898948 | 64116.5 |
| tonb-dependent receptor | DW935_21195 | Not Available | Negative | 4898967 - 4902140 | 117571.0 |
| fic family protein | DW935_21200 | Not Available | Negative | 4902961 - 4903719 | 29213.0 |
| fimbrillin family protein | DW935_21205 | Not Available | Negative | 4903732 - 4905360 | 62205.0 |
| hypothetical protein | DW935_21210 | Not Available | Positive | 4905361 - 4905568 | 7673.3 |
| ompa family protein | DW935_21215 | Not Available | Negative | 4905552 - 4906685 | 41289.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_21220 | Not Available | Negative | 4907091 - 4909148 | 77876.3 |
| tonb-dependent receptor | DW935_21225 | Not Available | Negative | 4909170 - 4912394 | 119855.0 |
| hypothetical protein | DW935_21235 | Not Available | Positive | 4914085 - 4915158 | 40912.1 |
| energy transducer tonb | DW935_21240 | Not Available | Positive | 4915244 - 4916674 | 54523.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

