Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4373 domain-containing protein | DW935_21120 | Not Available | Negative | 4887593 - 4888687 | 41896.8 |
| hypothetical protein | DW935_21135 | Not Available | Positive | 4890421 - 4890606 | 7208.35 |
| hypothetical protein | DW935_21140 | Not Available | Positive | 4890676 - 4890858 | 7435.5 |
| hypothetical protein | DW935_21145 | Not Available | Negative | 4890855 - 4891286 | 16452.7 |
| hypothetical protein | DW935_21150 | Not Available | Positive | 4891719 - 4891898 | 6908.45 |
| hypothetical protein | DW935_21155 | Not Available | Positive | 4892480 - 4892713 | 8588.75 |
| hypothetical protein | DW935_21160 | Not Available | Negative | 4892817 - 4893254 | 16481.6 |
| conjugative transposon protein tran | DW935_21165 | Not Available | Positive | 4893307 - 4894461 | 43874.6 |
| m23 family peptidase | DW935_21170 | Not Available | Positive | 4894458 - 4895018 | 20752.0 |
| hypothetical protein | DW935_21175 | Not Available | Positive | 4894990 - 4895331 | 13584.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

