Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW935_21015 | Not Available | Negative | 4875128 - 4875343 | 7991.84 |
| hypothetical protein | DW935_21020 | Not Available | Negative | 4875324 - 4875620 | 11631.5 |
| hypothetical protein | DW935_21025 | Not Available | Negative | 4875799 - 4876038 | 9221.45 |
| hypothetical protein | DW935_21030 | Not Available | Negative | 4876041 - 4876247 | 7730.17 |
| hypothetical protein | DW935_21035 | Not Available | Negative | 4876289 - 4876561 | 10242.3 |
| hypothetical protein | DW935_21040 | Not Available | Negative | 4876598 - 4876816 | 8386.03 |
| is21 family transposase | DW935_21045 | Not Available | Positive | 4877348 - 4878922 | 61949.2 |
| atp-binding protein | DW935_21050 | Not Available | Positive | 4878919 - 4879701 | 30383.1 |
| hypothetical protein | DW935_21060 | Not Available | Negative | 4880193 - 4881059 | 32298.1 |
| hypothetical protein | DW935_21065 | Not Available | Negative | 4881049 - 4883112 | 80397.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

