Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type atp synthase subunit d | DW935_20795 | Not Available | Positive | 4816149 - 4816754 | 23447.8 |
| v-type atp synthase subunit i | DW935_20800 | Not Available | Positive | 4816751 - 4818556 | 67265.4 |
| v-type atp synthase subunit k | DW935_20805 | Not Available | Positive | 4818770 - 4819234 | 15421.2 |
| glycosyl transferase | DW935_20810 | Not Available | Positive | 4819488 - 4821158 | 63540.8 |
| alpha-glucan family phosphorylase | DW935_20815 | Not Available | Positive | 4821187 - 4823751 | 98180.8 |
| fic family protein | DW935_20820 | Not Available | Negative | 4823908 - 4824753 | 32992.6 |
| fimbrillin family protein | DW935_20825 | Not Available | Negative | 4825301 - 4827106 | 68067.5 |
| hypothetical protein | DW935_20830 | Not Available | Negative | 4827118 - 4827351 | 8726.58 |
| para family protein | DW935_20835 | Not Available | Negative | 4827367 - 4828146 | 28471.4 |
| hypothetical protein | DW935_20840 | Not Available | Negative | 4828350 - 4828619 | 9733.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

