Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM43-4BH
Accession NumberQSFK00000000.1
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_18095 | Not Available | - | 4254234 - 4254452 | 8054.85 |
| Major capsid protein | DW935_18100 | Not Available | - | 4254467 - 4255780 | 48520.6 |
| Phage prohead protease | DW935_18105 | Not Available | - | 4255777 - 4256511 | 27853.3 |
| 1_nc_021791: phage portal protein | DW935_18110 | Not Available | - | 4256465 - 4257778 | 49078.2 |
| hypothetical | DW935_18115 | Not Available | + | 4258332 - 4258455 | 4671.72 |
| Phage associated-antirepressor | DW935_18120 | Not Available | + | 4258496 - 4259227 | 28236.2 |
| hypothetical protein | DW935_18125 | Not Available | + | 4259224 - 4259679 | 17291.6 |
| Putative endolysin/secretion activator protein | DW935_18130 | Not Available | + | 4259672 - 4260190 | 19774.9 |
| hypothetical protein | DW935_18135 | Not Available | + | 4260187 - 4260594 | 15851.6 |
| hypothetical protein | DW935_18140 | Not Available | + | 4260860 - 4261153 | 11359.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
