Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_20610 | Not Available | Negative | 4768624 - 4773555 | 191698.0 |
| is256 family transposase | DW935_20620 | Not Available | Positive | 4774912 - 4776141 | 47060.0 |
| hypothetical protein | DW935_20625 | Not Available | Negative | 4776201 - 4777079 | 33814.2 |
| atp-binding protein | DW935_20630 | Not Available | Negative | 4777097 - 4780759 | 142807.0 |
| hypothetical protein | DW935_20635 | Not Available | Negative | 4780743 - 4781294 | 21434.4 |
| hypothetical protein | DW935_20640 | Not Available | Negative | 4781334 - 4782530 | 47895.6 |
| type ii toxin-antitoxin system hipa family toxin | DW935_20645 | Not Available | Negative | 4782576 - 4784066 | 56948.5 |
| xre family transcriptional regulator | DW935_20650 | Not Available | Negative | 4784075 - 4784383 | 11819.3 |
| hypothetical protein | DW935_20655 | Not Available | Negative | 4784674 - 4785990 | 51369.4 |
| metallophosphatase | DW935_20665 | Not Available | Negative | 4786775 - 4787287 | 19865.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

