Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_20410 | Not Available | Negative | 4724378 - 4724563 | 7038.73 |
| hypothetical protein | DW935_20415 | Not Available | Positive | 4724565 - 4724786 | 8694.83 |
| hypothetical protein | DW935_20420 | Not Available | Positive | 4725090 - 4726967 | 72963.9 |
| duf3244 domain-containing protein | DW935_20425 | Not Available | Positive | 4727150 - 4727518 | 13903.9 |
| hypothetical protein | DW935_20430 | Not Available | Positive | 4727549 - 4728982 | 53750.0 |
| lysis protein | DW935_20435 | Not Available | Positive | 4729019 - 4730455 | 54180.7 |
| hypothetical protein | DW935_20440 | Not Available | Positive | 4730540 - 4732063 | 57695.4 |
| hypothetical protein | DW935_20445 | Not Available | Positive | 4732044 - 4732838 | 30456.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DW935_20450 | Not Available | Negative | 4732962 - 4733408 | 16503.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DW935_20455 | Not Available | Negative | 4733427 - 4734482 | 40182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

