Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucan family phosphorylase | DW935_20355 | Not Available | Negative | 4713514 - 4716072 | 98136.5 |
| sodium:proton antiporter | DW935_20360 | Not Available | Negative | 4716094 - 4718340 | 82334.0 |
| 6-phosphofructokinase | DW935_20365 | Not Available | Negative | 4718354 - 4719337 | 35605.6 |
| rna polymerase sigma factor | DW935_20370 | Not Available | Negative | 4719403 - 4719897 | 19138.0 |
| hsp20/alpha crystallin family protein | DW935_20375 | Not Available | Negative | 4719944 - 4720372 | 16368.5 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DW935_20380 | Not Available | Negative | 4720440 - 4721189 | 28491.2 |
| class i fructose-bisphosphate aldolase | DW935_20385 | Not Available | Negative | 4721203 - 4722252 | 38083.6 |
| ferritin | DW935_20390 | Not Available | Negative | 4722281 - 4722763 | 18303.6 |
| marc family protein | DW935_20395 | Not Available | Negative | 4722814 - 4723539 | 27104.4 |
| hypothetical protein | DW935_20405 | Not Available | Negative | 4724178 - 4724387 | 8005.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

