Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | DW935_20300 | Not Available | Negative | 4702044 - 4702907 | 31390.3 |
| phosphodiester glycosidase family protein | DW935_20305 | Not Available | Negative | 4702900 - 4703826 | 33916.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_20310 | Not Available | Negative | 4703992 - 4705299 | 49282.1 |
| tonb-dependent receptor | DW935_20315 | Not Available | Negative | 4705329 - 4708436 | 114505.0 |
| hypothetical protein | DW935_20320 | Not Available | Positive | 4708804 - 4708983 | 6484.07 |
| histidinol-phosphatase | DW935_20325 | Not Available | Positive | 4709013 - 4710104 | 41809.0 |
| polyphosphate kinase | DW935_20330 | Not Available | Positive | 4710435 - 4710728 | 11117.0 |
| ppx/gppa family phosphatase | DW935_20335 | Not Available | Positive | 4710721 - 4711629 | 33916.5 |
| methylglyoxal synthase | DW935_20345 | Not Available | Negative | 4712097 - 4712633 | 20470.6 |
| arginase family protein | DW935_20350 | Not Available | Negative | 4712688 - 4713497 | 30783.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

