Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DW935_20250 | Not Available | Positive | 4682169 - 4683059 | 33758.5 |
| tonb-dependent receptor | DW935_20255 | Not Available | Positive | 4683067 - 4685742 | 102190.0 |
| duf4249 domain-containing protein | DW935_20260 | Not Available | Positive | 4685749 - 4686780 | 39226.1 |
| sialate o-acetylesterase | DW935_20265 | Not Available | Negative | 4686812 - 4688749 | 72504.6 |
| alpha-glucuronidase | DW935_20270 | Not Available | Negative | 4688777 - 4690822 | 77119.1 |
| glycosyhydrolase | DW935_20275 | Not Available | Negative | 4690819 - 4693413 | 99458.8 |
| glycoside hydrolase | DW935_20280 | Not Available | Negative | 4693426 - 4695009 | 60214.5 |
| glycoside hydrolase | DW935_20285 | Not Available | Negative | 4695018 - 4697525 | 94279.2 |
| hypothetical protein | DW935_20290 | Not Available | Positive | 4697550 - 4697741 | 7501.54 |
| hybrid sensor histidine kinase/response regulator | DW935_20295 | Not Available | Positive | 4697763 - 4701824 | 155208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

