Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | DW935_19885 | Not Available | Negative | 4599920 - 4600606 | 25266.1 |
| methylcobamide--com methyltransferase | DW935_19890 | Not Available | Negative | 4600599 - 4601609 | 36544.3 |
| dna helicase | DW935_19895 | Not Available | Negative | 4601795 - 4605121 | 128325.0 |
| hypothetical protein | DW935_19900 | Not Available | Negative | 4605143 - 4605883 | 28001.5 |
| duf4038 domain-containing protein | DW935_19905 | Not Available | Negative | 4605980 - 4607443 | 55585.9 |
| arabinosidase | DW935_19910 | Not Available | Negative | 4607513 - 4608517 | 38218.6 |
| aldehyde dehydrogenase | DW935_19915 | Not Available | Negative | 4608703 - 4610139 | 52527.2 |
| helix-turn-helix domain-containing protein | DW935_19920 | Not Available | Negative | 4610355 - 4613141 | 106132.0 |
| duf4982 domain-containing protein | DW935_19930 | Not Available | Negative | 4615816 - 4618386 | 98048.9 |
| duf2264 domain-containing protein | DW935_19935 | Not Available | Negative | 4618398 - 4619660 | 48386.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

