Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3805 domain-containing protein | DW935_19830 | Not Available | Negative | 4585615 - 4586448 | 31589.1 |
| lactoylglutathione lyase | DW935_19835 | Not Available | Negative | 4586491 - 4586868 | 14724.3 |
| mbl fold metallo-hydrolase | DW935_19840 | Not Available | Negative | 4586886 - 4587677 | 30418.8 |
| hypothetical protein | DW935_19845 | Not Available | Negative | 4587687 - 4588877 | 45188.1 |
| rida family protein | DW935_19850 | Not Available | Negative | 4589040 - 4589417 | 13256.1 |
| transcription termination factor rho | DW935_19855 | Not Available | Positive | 4589845 - 4591854 | 74254.4 |
| right-handed parallel beta-helix repeat-containing protein | DW935_19860 | Not Available | Positive | 4591967 - 4593958 | 74808.6 |
| alpha-xylosidase | DW935_19865 | Not Available | Positive | 4593969 - 4596215 | 86415.5 |
| cobalamin-binding protein | DW935_19870 | Not Available | Positive | 4596221 - 4598023 | 66635.9 |
| na+/glucose cotransporter | DW935_19875 | Not Available | Positive | 4598057 - 4599628 | 57751.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

