Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | DW935_19780 | Not Available | Positive | 4573628 - 4573858 | 9115.21 |
| hypothetical protein | DW935_19785 | Not Available | Positive | 4573932 - 4574531 | 21420.8 |
| hypothetical protein | DW935_19790 | Not Available | Negative | 4574542 - 4575528 | 38588.2 |
| glycosyltransferase | DW935_19795 | Not Available | Negative | 4575582 - 4576487 | 35100.1 |
| 4fe-4s cluster-binding domain-containing protein | DW935_19800 | Not Available | Negative | 4576612 - 4577445 | 31390.2 |
| pyruvate formate lyase | DW935_19805 | Not Available | Negative | 4577432 - 4579474 | 78229.4 |
| flippase | DW935_19810 | Not Available | Negative | 4579471 - 4580916 | 54080.6 |
| transcriptional regulator | DW935_19815 | Not Available | Negative | 4581004 - 4581837 | 32283.7 |
| site-specific integrase | DW935_19820 | Not Available | Negative | 4582456 - 4583658 | 46824.9 |
| abc transporter atp-binding protein | DW935_19825 | Not Available | Negative | 4583742 - 4585607 | 72108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

