Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_19725 | Not Available | Positive | 4562853 - 4563068 | 8096.92 |
| conjugal transfer protein | DW935_19730 | Not Available | Positive | 4563623 - 4566067 | 94164.9 |
| duf4141 domain-containing protein | DW935_19740 | Not Available | Positive | 4566703 - 4567248 | 20163.3 |
| hypothetical protein | DW935_19745 | Not Available | Positive | 4567253 - 4568050 | 29865.8 |
| hypothetical protein | DW935_19750 | Not Available | Positive | 4568065 - 4568721 | 24723.7 |
| conjugative transposon protein tram | DW935_19755 | Not Available | Positive | 4568737 - 4569693 | 35304.6 |
| hypothetical protein | DW935_19760 | Not Available | Positive | 4569860 - 4571230 | 52582.0 |
| hypothetical protein | DW935_19765 | Not Available | Negative | 4571213 - 4571632 | 16252.7 |
| conjugative transposon protein tran | DW935_19770 | Not Available | Positive | 4571945 - 4573069 | 43023.2 |
| m23 family peptidase | DW935_19775 | Not Available | Positive | 4573080 - 4573631 | 20640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

