Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_19460 | Not Available | Positive | 4514635 - 4515132 | 19201.1 |
| hypothetical protein | DW935_19470 | Not Available | Positive | 4515890 - 4516209 | 12442.1 |
| glycosyltransferase | DW935_19475 | Not Available | Negative | 4516343 - 4517377 | 40784.6 |
| acyltransferase | DW935_19480 | Not Available | Negative | 4517358 - 4518092 | 27614.8 |
| alpha-1,2-fucosyltransferase | DW935_19485 | Not Available | Negative | 4518171 - 4518998 | 33097.9 |
| hypothetical protein | DW935_19490 | Not Available | Negative | 4519017 - 4520324 | 51135.9 |
| glycosyltransferase family 2 protein | DW935_19495 | Not Available | Negative | 4520331 - 4521221 | 35207.6 |
| lipopolysaccharide biosynthesis protein | DW935_19500 | Not Available | Negative | 4521249 - 4522811 | 59192.1 |
| hypothetical protein | DW935_19505 | Not Available | Positive | 4523136 - 4523384 | 9474.57 |
| hypothetical protein | DW935_19510 | Not Available | Negative | 4523517 - 4523900 | 14817.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

