Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW935_19400 | Not Available | Negative | 4500117 - 4501565 | 54497.3 |
| susc/raga family tonb-linked outer membrane protein | DW935_19405 | Not Available | Negative | 4501585 - 4504938 | 125069.0 |
| fecr family protein | DW935_19410 | Not Available | Negative | 4504954 - 4506123 | 44561.6 |
| rna polymerase sigma-70 factor | DW935_19415 | Not Available | Negative | 4506227 - 4506778 | 21576.8 |
| endonuclease muts2 | DW935_19420 | Not Available | Negative | 4506858 - 4509368 | 95377.9 |
| Trna-ser | Not Available | Not Available | Positive | 4509517 - 4509604 | Not Available |
| hypothetical protein | DW935_19435 | Not Available | Positive | 4510281 - 4511120 | 32269.6 |
| hypothetical protein | DW935_19440 | Not Available | Positive | 4511287 - 4511607 | 12186.9 |
| hypothetical protein | DW935_19445 | Not Available | Positive | 4511652 - 4512308 | 23325.0 |
| duf4848 domain-containing protein | DW935_19455 | Not Available | Positive | 4513643 - 4514611 | 36829.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

