Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_19350 | Not Available | Positive | 4486668 - 4487957 | 48157.5 |
| deoxyribonuclease iv | DW935_19355 | Not Available | Positive | 4488000 - 4488836 | 31410.4 |
| marr family transcriptional regulator | DW935_19360 | Not Available | Negative | 4489311 - 4491383 | 78512.4 |
| trpb-like pyridoxal phosphate-dependent enzyme | DW935_19365 | Not Available | Negative | 4492001 - 4493365 | 50196.2 |
| potassium transporter | DW935_19370 | Not Available | Positive | 4493542 - 4495389 | 68693.9 |
| trka family potassium uptake protein | DW935_19375 | Not Available | Positive | 4495392 - 4496078 | 25637.0 |
| duf4738 domain-containing protein | DW935_19380 | Not Available | Positive | 4496293 - 4496862 | 21153.6 |
| hypothetical protein | DW935_19385 | Not Available | Positive | 4496955 - 4497395 | 16654.3 |
| l-serine ammonia-lyase | DW935_19390 | Not Available | Negative | 4497575 - 4498783 | 43967.2 |
| metallophosphatase | DW935_19395 | Not Available | Negative | 4498933 - 4500096 | 44497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

