Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxylamine reductase | DW935_19300 | Not Available | Negative | 4476009 - 4477667 | 61118.4 |
| crp/fnr family transcriptional regulator | DW935_19305 | Not Available | Positive | 4477782 - 4478372 | 22019.1 |
| arylsulfatase | DW935_19310 | Not Available | Negative | 4478653 - 4480200 | 56931.5 |
| hypothetical protein | DW935_19315 | Not Available | Positive | 4480679 - 4481416 | 27845.7 |
| dna-binding response regulator | DW935_19320 | Not Available | Positive | 4481637 - 4482314 | 25927.3 |
| sensor histidine kinase | DW935_19325 | Not Available | Positive | 4482315 - 4483601 | 49706.0 |
| hypothetical protein | DW935_19330 | Not Available | Positive | 4483704 - 4484141 | 16856.3 |
| udp-2,3-diacylglucosamine diphosphatase | DW935_19335 | Not Available | Positive | 4484318 - 4485121 | 31135.1 |
| glycosyltransferase | DW935_19340 | Not Available | Positive | 4485118 - 4486245 | 43436.4 |
| Trna-glu | Not Available | Not Available | Positive | 4486451 - 4486525 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

