Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_19250 | Not Available | Positive | 4468168 - 4468638 | 17754.4 |
| n-acetyltransferase | DW935_19255 | Not Available | Positive | 4468635 - 4469171 | 20476.6 |
| yqge/algh family protein | DW935_19260 | Not Available | Negative | 4469164 - 4469754 | 22412.9 |
| hypothetical protein | DW935_19265 | Not Available | Positive | 4469810 - 4470007 | 7902.13 |
| Trna-asp | Not Available | Not Available | Positive | 4469985 - 4470058 | Not Available |
| energy transducer tonb | DW935_19275 | Not Available | Negative | 4470220 - 4471605 | 51987.2 |
| hypothetical protein | DW935_19280 | Not Available | Negative | 4471635 - 4472102 | 18222.9 |
| mobilization protein | DW935_19285 | Not Available | Negative | 4472249 - 4472707 | 18105.8 |
| glycoside hydrolase family 95 protein | DW935_19290 | Not Available | Positive | 4472727 - 4475186 | 91846.4 |
| iron-sulfur cluster repair di-iron protein | DW935_19295 | Not Available | Negative | 4475266 - 4475997 | 27911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

