Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | DW935_19085 | Not Available | Positive | 4438103 - 4438876 | 27519.5 |
| phosphomethylpyrimidine synthase thic | DW935_19090 | Not Available | Positive | 4438885 - 4440585 | 63475.9 |
| hypothetical protein | DW935_19095 | Not Available | Positive | 4440607 - 4441122 | 19574.8 |
| flavodoxin family protein | DW935_19100 | Not Available | Positive | 4441122 - 4441694 | 21328.5 |
| 2-iminoacetate synthase thih | DW935_19105 | Not Available | Positive | 4441783 - 4442913 | 43251.8 |
| hesa/moeb/thif family protein | DW935_19110 | Not Available | Positive | 4442951 - 4443685 | 27043.9 |
| glutathionylspermidine synthase family protein | DW935_19115 | Not Available | Negative | 4443798 - 4444922 | 43012.5 |
| hypothetical protein | DW935_19120 | Not Available | Negative | 4444935 - 4445288 | 12947.3 |
| thiamine phosphate synthase | DW935_19125 | Not Available | Positive | 4445508 - 4446116 | 22934.7 |
| ribose-phosphate pyrophosphokinase | DW935_19130 | Not Available | Positive | 4446281 - 4447219 | 34190.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

