Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4431870 - 4431953 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4432001 - 4432073 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4432087 - 4432173 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4432194 - 4432277 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4432325 - 4432397 | Not Available |
| carboxynorspermidine decarboxylase | DW935_19060 | Not Available | Negative | 4432571 - 4433734 | 44398.1 |
| atp-dependent dna helicase | DW935_19065 | Not Available | Negative | 4433767 - 4436157 | 91472.8 |
| superoxide dismutase | DW935_19070 | Not Available | Positive | 4436266 - 4436883 | 23314.6 |
| sulfur carrier protein this | DW935_19075 | Not Available | Positive | 4437269 - 4437469 | 7153.82 |
| thiamine phosphate synthase | DW935_19080 | Not Available | Positive | 4437459 - 4438085 | 23065.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

