Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | DW935_18985 | Not Available | Positive | 4418310 - 4418590 | 10611.9 |
| abc transporter permease | DW935_18990 | Not Available | Negative | 4419594 - 4422014 | 91819.4 |
| abc transporter atp-binding protein | DW935_18995 | Not Available | Negative | 4422014 - 4422724 | 26379.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_19000 | Not Available | Negative | 4422740 - 4423990 | 47799.6 |
| tolc family protein | DW935_19005 | Not Available | Negative | 4423996 - 4425303 | 50664.0 |
| sigma-54-dependent fis family transcriptional regulator | DW935_19010 | Not Available | Positive | 4425635 - 4426966 | 50256.9 |
| pas domain-containing protein | DW935_19015 | Not Available | Positive | 4426972 - 4428294 | 50256.6 |
| gnat family n-acetyltransferase | DW935_19020 | Not Available | Negative | 4428421 - 4429953 | 59330.0 |
| glutamine synthetase | DW935_19025 | Not Available | Positive | 4430159 - 4431661 | 56034.0 |
| Trna-gly | Not Available | Not Available | Positive | 4431782 - 4431857 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

