Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_18885 | Not Available | Negative | 4392491 - 4392991 | 19040.3 |
| duf3871 family protein | DW935_18890 | Not Available | Negative | 4393653 - 4394666 | 38202.7 |
| duf5131 family protein | DW935_18895 | Not Available | Negative | 4394998 - 4395690 | 26967.7 |
| hypothetical protein | DW935_18900 | Not Available | Negative | 4395693 - 4397435 | 67646.1 |
| hypothetical protein | DW935_18905 | Not Available | Negative | 4397634 - 4398632 | 37787.7 |
| hypothetical protein | DW935_18910 | Not Available | Negative | 4398806 - 4399804 | 39031.6 |
| site-specific integrase | DW935_18915 | Not Available | Negative | 4399882 - 4401096 | 46681.7 |
| Trna-gly | Not Available | Not Available | Positive | 4401212 - 4401287 | Not Available |
| cobalamin biosynthesis protein cobd | DW935_18925 | Not Available | Negative | 4401323 - 4402255 | 34501.9 |
| pyridoxal phosphate-dependent class ii aminotransferase | DW935_18930 | Not Available | Negative | 4402237 - 4403247 | 38761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

