Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW935_18830 | Not Available | Negative | 4383567 - 4384032 | 18480.5 |
| hypothetical protein | DW935_18835 | Not Available | Positive | 4384135 - 4384350 | 8249.12 |
| hypothetical protein | DW935_18840 | Not Available | Positive | 4385082 - 4386335 | 48858.8 |
| Trna-gly | Not Available | Not Available | Positive | 4386953 - 4387050 | Not Available |
| hypothetical protein | DW935_18850 | Not Available | Negative | 4387677 - 4388096 | 16175.7 |
| hypothetical protein | DW935_18855 | Not Available | Negative | 4388118 - 4388753 | 24695.7 |
| penicillin-binding protein | DW935_18860 | Not Available | Negative | 4388753 - 4389613 | 30954.2 |
| serine protease | DW935_18865 | Not Available | Negative | 4389620 - 4390738 | 42698.4 |
| hypothetical protein | DW935_18870 | Not Available | Negative | 4390813 - 4391475 | 26221.9 |
| hypothetical protein | DW935_18880 | Not Available | Negative | 4392138 - 4392404 | 10149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

