Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | DW935_18725 | Not Available | Positive | 4368174 - 4369406 | 47151.0 |
| duf5119 domain-containing protein | DW935_18730 | Not Available | Positive | 4369403 - 4370323 | 34233.3 |
| fimbrillin family protein | DW935_18735 | Not Available | Positive | 4370364 - 4371497 | 41626.6 |
| hypothetical protein | DW935_18740 | Not Available | Negative | 4371686 - 4371943 | 9309.24 |
| para family protein | DW935_18745 | Not Available | Negative | 4371948 - 4372703 | 27510.6 |
| hypothetical protein | DW935_18750 | Not Available | Positive | 4372944 - 4373813 | 34096.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | DW935_18755 | Not Available | Negative | 4373764 - 4374651 | 35023.9 |
| dna-binding protein | DW935_18760 | Not Available | Positive | 4374884 - 4375747 | 33387.1 |
| dna resolvase | DW935_18765 | Not Available | Positive | 4375760 - 4376398 | 23696.9 |
| hypothetical protein | DW935_18775 | Not Available | Negative | 4377103 - 4377414 | 12259.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

