Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | DW935_18525 | Not Available | Positive | 4326140 - 4327675 | 57327.7 |
| hypothetical protein | DW935_18530 | Not Available | Positive | 4327868 - 4328668 | 30043.9 |
| patatin family protein | DW935_18535 | Not Available | Negative | 4328808 - 4329662 | 32936.4 |
| peptidase m24 family protein | DW935_18540 | Not Available | Positive | 4329992 - 4331383 | 51737.2 |
| aminopeptidase | DW935_18545 | Not Available | Positive | 4331412 - 4332623 | 45970.4 |
| single-stranded-dna-specific exonuclease recj | DW935_18550 | Not Available | Positive | 4332738 - 4334510 | 66543.5 |
| recq family atp-dependent dna helicase | DW935_18555 | Not Available | Positive | 4334628 - 4336523 | 72894.9 |
| o-glcnacase | DW935_18560 | Not Available | Positive | 4336570 - 4338783 | 84930.2 |
| tetratricopeptide repeat protein | DW935_18565 | Not Available | Positive | 4338798 - 4339748 | 35751.7 |
| ai-2e family transporter | DW935_18570 | Not Available | Positive | 4339808 - 4340809 | 37016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

