Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW935_18475 | Not Available | Positive | 4320268 - 4320915 | 24840.1 |
| alanine:cation symporter family protein | DW935_18480 | Not Available | Positive | 4320921 - 4322321 | 51044.3 |
| hypothetical protein | DW935_18485 | Not Available | Positive | 4322455 - 4323081 | 24334.1 |
| uracil-dna glycosylase family protein | DW935_18490 | Not Available | Positive | 4323096 - 4323689 | 23002.2 |
| Trna-trp | Not Available | Not Available | Positive | 4323757 - 4323832 | Not Available |
| radical sam protein | DW935_18500 | Not Available | Negative | 4323889 - 4324434 | 20479.5 |
| 6-carboxytetrahydropterin synthase qued | DW935_18505 | Not Available | Negative | 4324421 - 4324753 | 12835.3 |
| duf454 domain-containing protein | DW935_18510 | Not Available | Positive | 4324888 - 4325250 | 14082.9 |
| hypothetical protein | DW935_18515 | Not Available | Positive | 4325423 - 4325716 | 11779.2 |
| cell division protein zapa | DW935_18520 | Not Available | Positive | 4325746 - 4326039 | 11772.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

