Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | DW935_18375 | Not Available | Negative | 4298242 - 4299081 | 32360.3 |
| conjugative transposon protein tram | DW935_18380 | Not Available | Negative | 4299083 - 4300192 | 41780.8 |
| hypothetical protein | DW935_18385 | Not Available | Negative | 4300196 - 4300627 | 16696.8 |
| conjugative transposon protein trak | DW935_18390 | Not Available | Negative | 4300627 - 4301241 | 23412.7 |
| plasmid transfer protein | DW935_18395 | Not Available | Negative | 4301274 - 4302296 | 37691.8 |
| hypothetical protein | DW935_18400 | Not Available | Negative | 4302289 - 4302945 | 25994.3 |
| plasmid transfer protein | DW935_18405 | Not Available | Negative | 4302947 - 4303621 | 25473.4 |
| conjugal transfer protein trag | DW935_18410 | Not Available | Negative | 4303632 - 4306472 | 110290.0 |
| duf4133 domain-containing protein | DW935_18415 | Not Available | Negative | 4306478 - 4306777 | 11136.2 |
| duf4134 domain-containing protein | DW935_18420 | Not Available | Negative | 4306779 - 4307093 | 11030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

