Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DW935_18325 | Not Available | Positive | 4292469 - 4293134 | 25188.4 |
| zeta toxin family protein | DW935_18330 | Not Available | Negative | 4293181 - 4294047 | 32860.7 |
| hypothetical protein | DW935_18335 | Not Available | Negative | 4294034 - 4294294 | 9998.22 |
| duf3990 domain-containing protein | DW935_18340 | Not Available | Negative | 4294316 - 4294795 | 18186.0 |
| duf3791 domain-containing protein | DW935_18345 | Not Available | Negative | 4294792 - 4295241 | 17702.2 |
| hypothetical protein | DW935_18350 | Not Available | Negative | 4295313 - 4295582 | 10425.4 |
| hypothetical protein | DW935_18355 | Not Available | Positive | 4296188 - 4296439 | 9473.27 |
| ompa family protein | DW935_18360 | Not Available | Negative | 4296420 - 4297061 | 23821.2 |
| hypothetical protein | DW935_18365 | Not Available | Negative | 4297064 - 4297723 | 23717.9 |
| hypothetical protein | DW935_18370 | Not Available | Negative | 4297726 - 4298229 | 19086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

