Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_18275 | Not Available | Negative | 4285652 - 4286095 | 16577.4 |
| hypothetical protein | DW935_18280 | Not Available | Negative | 4286106 - 4286378 | 10359.4 |
| hu family dna-binding protein | DW935_18285 | Not Available | Negative | 4286369 - 4286647 | 10589.0 |
| hypothetical protein | DW935_18290 | Not Available | Negative | 4286659 - 4287012 | 13934.3 |
| dna topoisomerase i | DW935_18295 | Not Available | Negative | 4287009 - 4287845 | 31691.2 |
| plasmid transfer protein | DW935_18300 | Not Available | Negative | 4287846 - 4288553 | 26606.8 |
| hypothetical protein | DW935_18305 | Not Available | Negative | 4288534 - 4289037 | 20038.8 |
| duf3991 domain-containing protein | DW935_18310 | Not Available | Negative | 4289034 - 4290143 | 42741.0 |
| duf3945 domain-containing protein | DW935_18315 | Not Available | Negative | 4290148 - 4291707 | 58899.6 |
| duf4099 domain-containing protein | DW935_18320 | Not Available | Negative | 4291709 - 4292488 | 30087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

