Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_18225 | Not Available | Positive | 4275135 - 4275569 | 16497.8 |
| tetr/acrr family transcriptional regulator | DW935_18230 | Not Available | Negative | 4275658 - 4276380 | 27874.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW935_18235 | Not Available | Negative | 4276383 - 4277618 | 45637.2 |
| hypothetical protein | DW935_18240 | Not Available | Positive | 4277787 - 4278785 | 37421.1 |
| hypothetical protein | DW935_18245 | Not Available | Positive | 4278997 - 4280319 | 49429.5 |
| hypothetical protein | DW935_18250 | Not Available | Positive | 4280329 - 4282008 | 63365.5 |
| hypothetical protein | DW935_18255 | Not Available | Positive | 4282085 - 4282480 | 14967.8 |
| xre family transcriptional regulator | DW935_18260 | Not Available | Negative | 4282915 - 4283301 | 14707.7 |
| type iv secretory system conjugative dna transfer family protein | DW935_18265 | Not Available | Negative | 4283294 - 4285249 | 74508.9 |
| hypothetical protein | DW935_18270 | Not Available | Negative | 4285253 - 4285477 | 8469.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

