Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoic acid--coa ligase | DW935_17860 | Not Available | Positive | 4207999 - 4209084 | 40516.3 |
| arac family transcriptional regulator | DW935_17865 | Not Available | Positive | 4209340 - 4210224 | 34283.2 |
| duf4250 domain-containing protein | DW935_17870 | Not Available | Negative | 4210287 - 4210463 | 6921.42 |
| atp-dependent helicase | DW935_17875 | Not Available | Negative | 4210578 - 4212857 | 86435.2 |
| hypothetical protein | DW935_17880 | Not Available | Negative | 4212913 - 4213380 | 16988.2 |
| virulence protein e | DW935_17885 | Not Available | Positive | 4213566 - 4214135 | 21603.9 |
| duf3987 domain-containing protein | DW935_17890 | Not Available | Positive | 4214139 - 4216082 | 71709.5 |
| duf4248 domain-containing protein | DW935_17895 | Not Available | Positive | 4216100 - 4216324 | 8370.25 |
| dna-binding protein | DW935_17900 | Not Available | Positive | 4216607 - 4217146 | 19200.7 |
| n-acetylmuramoyl-l-alanine amidase | DW935_17905 | Not Available | Positive | 4217457 - 4217975 | 19675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

