Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_17655 | Not Available | Negative | 4141514 - 4141813 | 11658.8 |
| tonb-dependent receptor | DW935_17660 | Not Available | Positive | 4142005 - 4145049 | 114180.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_17665 | Not Available | Positive | 4145076 - 4146695 | 61301.8 |
| hypothetical protein | DW935_17670 | Not Available | Positive | 4146835 - 4150191 | 126699.0 |
| hybrid sensor histidine kinase/response regulator | DW935_17675 | Not Available | Positive | 4150332 - 4154318 | 150535.0 |
| rubrerythrin family protein | DW935_17680 | Not Available | Negative | 4154412 - 4154990 | 21626.4 |
| duf4884 domain-containing protein | DW935_17685 | Not Available | Positive | 4155171 - 4155440 | 10154.0 |
| stas domain-containing protein | DW935_17690 | Not Available | Positive | 4155539 - 4157221 | 60560.7 |
| hypothetical protein | DW935_17695 | Not Available | Negative | 4157411 - 4157599 | 6688.22 |
| radical sam protein | DW935_17700 | Not Available | Negative | 4158132 - 4158908 | 29363.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

