Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_17555 | Not Available | Positive | 4122356 - 4122562 | 8068.73 |
| atp-dependent dna helicase recq | DW935_17560 | Not Available | Negative | 4122665 - 4125082 | 91708.0 |
| Trna-thr | Not Available | Not Available | Positive | 4125193 - 4125266 | Not Available |
| hypothetical protein | DW935_17570 | Not Available | Positive | 4125271 - 4125519 | 9849.11 |
| duf4199 domain-containing protein | DW935_17575 | Not Available | Positive | 4125526 - 4126059 | 20538.6 |
| glycosyltransferase | DW935_17580 | Not Available | Positive | 4126063 - 4127016 | 36365.1 |
| hypothetical protein | DW935_17585 | Not Available | Positive | 4127018 - 4127566 | 20757.9 |
| hypothetical protein | DW935_17590 | Not Available | Positive | 4127514 - 4128215 | 26539.9 |
| manganese efflux pump | DW935_17595 | Not Available | Positive | 4128219 - 4128791 | 21225.7 |
| fad:protein fmn transferase | DW935_17600 | Not Available | Positive | 4128805 - 4129821 | 37813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

