Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | DW935_17505 | Not Available | Negative | 4102701 - 4104845 | 82018.8 |
| right-handed parallel beta-helix repeat-containing protein | DW935_17510 | Not Available | Negative | 4104860 - 4106683 | 68562.0 |
| glycoside hydrolase family 127 protein | DW935_17515 | Not Available | Negative | 4106708 - 4108813 | 78760.8 |
| alpha-rhamnosidase | DW935_17520 | Not Available | Negative | 4109041 - 4113015 | 149885.0 |
| duf4038 domain-containing protein | DW935_17525 | Not Available | Negative | 4113021 - 4114490 | 56339.4 |
| glycoside hydrolase family 88 protein | DW935_17530 | Not Available | Negative | 4114641 - 4115840 | 45343.0 |
| glycoside hydrolase family 95 protein | DW935_17535 | Not Available | Negative | 4115889 - 4118333 | 92078.9 |
| enolase | DW935_17540 | Not Available | Positive | 4118499 - 4119794 | 46741.8 |
| aaa family atpase | DW935_17545 | Not Available | Negative | 4119890 - 4121467 | 60933.4 |
| hypothetical protein | DW935_17550 | Not Available | Positive | 4122116 - 4122316 | 7334.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

