Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | DW935_17455 | Not Available | Positive | 4092969 - 4094078 | 42812.3 |
| glycosyltransferase family 1 protein | DW935_17460 | Not Available | Positive | 4094101 - 4095213 | 43076.5 |
| glycosyltransferase | DW935_17465 | Not Available | Positive | 4095198 - 4096298 | 42469.7 |
| glycosyltransferase | DW935_17470 | Not Available | Positive | 4096312 - 4097400 | 42027.1 |
| colanic acid biosynthesis acetyltransferase wcaf | DW935_17475 | Not Available | Positive | 4097397 - 4097951 | 20385.8 |
| glycosyltransferase | DW935_17480 | Not Available | Positive | 4097965 - 4098783 | 31020.1 |
| gdp-mannose 4,6-dehydratase | DW935_17485 | Not Available | Positive | 4098866 - 4099945 | 40983.1 |
| gdp-l-fucose synthase | DW935_17490 | Not Available | Positive | 4099966 - 4101048 | 40994.2 |
| mannose-1-phosphate guanylyltransferase | DW935_17495 | Not Available | Positive | 4101063 - 4102106 | 39429.4 |
| hypothetical protein | DW935_17500 | Not Available | Positive | 4102110 - 4102538 | 16939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

