Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DW935_17405 | Not Available | Negative | 4076667 - 4078976 | 83744.1 |
| alpha-l-fucosidase | DW935_17410 | Not Available | Negative | 4079030 - 4080421 | 53594.9 |
| hypothetical protein | DW935_17415 | Not Available | Negative | 4080635 - 4081135 | 19223.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW935_17420 | Not Available | Negative | 4081402 - 4083342 | 72026.3 |
| susc/raga family tonb-linked outer membrane protein | DW935_17425 | Not Available | Negative | 4083364 - 4086459 | 114033.0 |
| hypothetical protein | DW935_17430 | Not Available | Positive | 4086646 - 4088163 | 56721.3 |
| hypothetical protein | DW935_17435 | Not Available | Positive | 4088318 - 4089616 | 50695.0 |
| acyltransferase | DW935_17440 | Not Available | Positive | 4089644 - 4090669 | 40048.6 |
| glycosyltransferase | DW935_17445 | Not Available | Positive | 4090676 - 4091926 | 48122.3 |
| polysaccharide pyruvyl transferase family protein | DW935_17450 | Not Available | Positive | 4091923 - 4092981 | 40773.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

