Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | DW935_17250 | Not Available | Positive | 4029371 - 4030147 | 29605.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DW935_17255 | Not Available | Positive | 4030144 - 4031340 | 43166.3 |
| dna repair protein recn | DW935_17260 | Not Available | Positive | 4031456 - 4033117 | 62006.0 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW935_17265 | Not Available | Positive | 4033168 - 4033935 | 28167.3 |
| tetratricopeptide repeat protein | DW935_17270 | Not Available | Positive | 4033972 - 4035672 | 62540.1 |
| anaerobic sulfatase-maturation protein | DW935_17275 | Not Available | Negative | 4035877 - 4037112 | 47995.5 |
| atpase | DW935_17280 | Not Available | Negative | 4037306 - 4038451 | 42884.4 |
| phosphatase pap2 family protein | DW935_17285 | Not Available | Negative | 4038690 - 4039466 | 29189.8 |
| hypothetical protein | DW935_17290 | Not Available | Negative | 4039795 - 4042191 | 90541.4 |
| alpha-1,3/4-fucosidase | DW935_17295 | Not Available | Negative | 4042438 - 4044297 | 69765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

