Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | DW935_17195 | Not Available | Positive | 4016442 - 4017239 | 30147.3 |
| putative transporter | DW935_17200 | Not Available | Positive | 4017316 - 4018977 | 59396.9 |
| fructose-bisphosphatase class iii | DW935_17205 | Not Available | Positive | 4018987 - 4020987 | 76533.3 |
| aspartate 1-decarboxylase | DW935_17210 | Not Available | Negative | 4021117 - 4021467 | 12822.7 |
| pantoate--beta-alanine ligase | DW935_17215 | Not Available | Negative | 4021489 - 4022337 | 31339.6 |
| glycogen synthase | DW935_17220 | Not Available | Positive | 4022689 - 4023513 | 31946.1 |
| duf4270 domain-containing protein | DW935_17225 | Not Available | Positive | 4023533 - 4024945 | 53442.8 |
| hypothetical protein | DW935_17230 | Not Available | Positive | 4025198 - 4025866 | 24717.7 |
| duf3127 domain-containing protein | DW935_17240 | Not Available | Negative | 4027664 - 4028041 | 13929.4 |
| dna polymerase iii subunit beta | DW935_17245 | Not Available | Positive | 4028195 - 4029319 | 41323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

