Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | DW935_17020 | Not Available | Positive | 3969047 - 3970324 | 47461.1 |
| hypothetical protein | DW935_17025 | Not Available | Negative | 3970710 - 3970985 | 10205.1 |
| duf4738 domain-containing protein | DW935_17030 | Not Available | Negative | 3971035 - 3971823 | 29375.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DW935_17035 | Not Available | Negative | 3971847 - 3973160 | 48150.3 |
| spor domain-containing protein | DW935_17040 | Not Available | Positive | 3973279 - 3974409 | 42094.4 |
| fha domain-containing protein | DW935_17045 | Not Available | Positive | 3974425 - 3974949 | 19818.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW935_17050 | Not Available | Positive | 3974954 - 3975463 | 19474.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW935_17055 | Not Available | Positive | 3975472 - 3976509 | 37449.5 |
| adenosylcobinamide-gdp ribazoletransferase | DW935_17060 | Not Available | Positive | 3976512 - 3977261 | 27830.7 |
| alpha-ribazole phosphatase | DW935_17065 | Not Available | Positive | 3977255 - 3977785 | 20094.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

